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Sagan discusses the story of the Heike crab and artificial selection of crabs resembling samurai warriors, as an opening into a larger discussion of evolution through natural selection (and the pitfalls of intelligent design). Among the topics are the development of life on the Cosmic Calendar and the Cambrian explosion; the function of DNA in growth; genetic replication, repairs, and mutation; the common biochemistry of terrestrial organisms; the creation of the molecules of life in the Miller-Urey experiment; and speculation on alien life (such as life in Jupiter's clouds). In the Cosmos Update ten years later, Sagan remarks on RNA also controlling chemical reactions and reproducing itself and the different roles of comets (potentially carrying organic molecules or causing the Cretaceous–Paleogene extinction event).

The idea of intelligence is explored in the concepts of computers (using bits as their basic units of information), whales (in their songs and their disruptions by human activities), DNA, the human brain (the evolution of the brain stem, frontal lobes, neurons, cerebral hemispheres, and corpus callosum under the Triune Brain Model), and man-made structures for collective intelligence (cities, libraries, books, computers, and satellites). The episode ends with speculation on alien intelligence and the information conveyed on the Voyager Golden Record.

Sagan reflects on the future of humanity and the question of 'who speaks for Earth?' when meeting extraterrestrials. He discusses the very different meetings of the Tlingit people and explorer Jean-François de La Perouse with the destruction of the Aztecs by Spanish conquistadors, the looming threat of nuclear warfare, and the threats shown by destruction of the Library of Alexandria and the murder of Hypatia. The episode ends with an overview of the beginning of the universe, the evolution of life, and the accomplishments of humanity and makes a plea to mankind to cherish life and continue its journey in the cosmos. The Cosmos Update notes the preliminary reconnaissance of planets with spacecraft, the fall of the Berlin Wall and the end of apartheid in South Africa, and measures towards the reduction of nuclear weapons.

The final part reveals how our knowledge of cells has brought us to the brink of one of the most important moments in history. Scientists are close to repeating what has happened only once in four billion years - the creation of a new life form.

In this ground-breaking film, Sir David Attenborough takes us on a journey through the world-famous Natural History Museum in London in a captivating tale of discovery, adventure, and magic, where state-of-the-art CGI, science, and research combine to bring the museum's now long-extinct inhabitants to life to discover how these animals once roamed the planet. As the doors are locked and night falls, Attenborough stays behind and meets some of the most fascinating extinct creatures which come alive in front of his eyes; dinosaurs, ice age beasts, and giant reptiles.
The film fulfils a lifelong dream of him, who said: 'I have been coming to the Natural History Museum since I was a boy. It's one of the great places to come to learn about natural history. In this film we have the technology to bring back to life some of the most romantic and extraordinary extinct creatures that can be conceived; some are relatively recent animals like the dodo, others older like the dinosaurs, and some we only know through fossil evidence. Using our current scientific knowledge, this film brings these creatures alive, allowing me to look at some of the biggest questions surrounding them.'

Moving on to Ethiopia 3.2 million years ago, we witness the beginnings of mankind via a group of australopithecus - a type of ape which, like us, walks upright on two legs. But unlike us, these early members of the human family weren't predators, they were prey. Things get worse for the group as they are hunted by a sabre-tooth cat called dinofelis and fall victim to other dangers such as malaria, rival australopithecus and a rampaging 14-tonne deinotherium.